BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H09LP1|AL428296
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1518 805 0.0
3x_Contig784 684 0.0
>3x_Contig1518
Length = 11021
Score = 805 bits (406), Expect = 0.0
Identities = 449/460 (97%), Gaps = 5/460 (1%)
Strand = Plus / Plus
Query: 475 ttgtcgatga-cgtaga-tctttctctgtttgag---aaaataggaatattcgatagaga 529
|||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 228 ttgtcgatgaacgtagactctttctctgtttgaagaaaaaataggaatattcgatagaga 287
Query: 530 gtgatcactgtgaatcattgaaatggcatcactttcgtcgtctgtggtggcggccgtggt 589
|| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 288 gttatcactgttaatcattgaaatggcatcactttcgtcgtctgttgtggcggccgttgt 347
Query: 590 agttgtactggcactttctggttttgcactagttggagcactggaatccgcatcctgttt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agttgtactggcactttctggttttgcactagttggagcactggaatccgcatcctgttt 407
Query: 650 ctcctcttgctctttgaatcttttcttcaactttgctagtcttcttcttctctttaattc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ctcctcttgctctttgaatcttttcttcaactttgctagtcttcttcttctctttaattc 467
Query: 710 cattgtctttctatcctcttgttcttcgagctgttcatctgttgaagaatggccagtagc 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 cattgtctttctatcctcttgttcttcgagctgttcatctgttgaagaatggccagtagc 527
Query: 770 ataacttgcaaaagtttcgacattgaaatcggggaaaagtcttggtccatattcgttcac 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ataacttgcaaaagtttcgacattgaaatcggggaaaagtcttggtccatattcgttcac 587
Query: 830 gatttcattaatcttttcagacaagacagtacgttcgtcttttaatgactgccagccctt 889
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 588 gatttcattaatcttttcagacaagacagtacgttcgtcttttaatgactgcaagccctt 647
Query: 890 tggagaggtgactgccaagtataaaggtctgatggacttg 929
||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tggagaggtgactgccaagtataaaggtctgatggacttg 687
>3x_Contig784
Length = 1678
Score = 684 bits (345), Expect = 0.0
Identities = 372/377 (98%), Gaps = 3/377 (0%)
Strand = Plus / Minus
Query: 1 aaattcggtaattatcccgaatgccctctgtatcagcgtgttttcttcgttctctgtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaattcggtaattatcccgaatgccctctgtatcagcgtgttttcttcgttctctgtaaa 318
Query: 61 tccttcaacacaatctaccgccattttcattgctttgcttttgtctgccctttatcttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tccttcaacacaatctaccgccattttcattgctttgcttttgtctgccctttatcttaa 258
Query: 121 tgaaaccacaactcacactctcactggaataatagactctttaattcgcactttgtcaaa 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 257 tgaaaccacaactcacactctcactggaattatagactctttaattcgcactttgtcaaa 198
Query: 181 ttagaaatatacaaatatcaactaaataacattattaaacgtaactgttcaaagaaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttagaaatatacaaatatcaactaaataacattattaaacgtaactgttcaaagaaccat 138
Query: 241 cctgaccaaacagaaatctgtctaatacatgtaattattacggttagttgtagatttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cctgaccaaacagaaatctgtctaatacatgtaattattacggttagttgtagatttatt 78
Query: 301 tatttcagtgtataatgtgttaaaa-agattgtac-aatagtaattagtaca-aaatcac 357
||||||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||
Sbjct: 77 tatttcagtgtataatgtgttaaaagagattgtacaaatagttattagtacacaaatcac 18
Query: 358 aaagtcatcaatcgagt 374
|||||||||||||||||
Sbjct: 17 aaagtcatcaatcgagt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8449
Number of Sequences: 1807
Number of extensions: 8449
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 2
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)